Entering edit mode
Alexandra Zerck
▴
10
@alexandra-zerck-5746
Last seen 10.2 years ago
Hello all,
I am using the rGADEM package to find motifs in a ChIP-Seq data set.
Now
I want to rank the reported motifs based on their significance. Is
there
a possibility to retrieve the e-Value for each motif? I can see that
the
tool verbosely reports a fitness value that corresponds to
log(e-Value),
however I didn't find a way to access it from the resulting gadem
object.
Any suggestions?
Thanks,
Alexandra