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Jeff Gentry
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@jeff-gentry-12
Last seen 10.1 years ago
Hello ...
I have just put a new package in the system, contributed by Xiaogang
Zhong, Leslie Cope, Elizabeth Garret and Giovanni Parmigiani. The
package
is named 'MergeMaid', and it should be available to the public
tommorow
morning (Eastern US time)
Package: MergeMaid
Version: 2.0-1
Title: Merge Maid
Author: Xiaogang Zhong <zhong@ams.jhu.edu> Leslie Cope <cope@jhu.edu>
Elizabeth
Garrett
<esg@jhu.edu> Giovanni Parmigiani <gp@jhu.edu>
Maintainer: Xiaogang Zhong <zhong@ams.jhu.edu>
Description: The functions in this R extension are intended for
cross-study comparison of gene expression array data. Required
from the user is gene expression matrices, their corresponding
gene-id vectors and other useful information, and they could
be 'list','matrix','exprSet'. The main function is
'mergeExprs'
which transforms the input objects into data in the merged
format,
such that common genes in different datasets can be easily
found.
And the function 'intcor' calculate the correlation
coefficients.
Other functions use the output from 'modelOutcome' to
graphically
display the results and cross-validate associations of gene
expression data with survival.
Depends: R (>= 1.7.0), survival
License: GPL version 2 or higher
URL: http://astor.som.jhmi.edu/MergeMaid