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chawla
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190
@chawla-4416
Last seen 10.4 years ago
Hi
In R 2.15.2
I try to install biomaRt and Rcurl by
source("http://bioconductor.org/biocLite.R")
biocLite("biomaRt")
And I get the error below after some lines of processing:
ERROR: compilation failed for package 'RCurl'
* removing
'/gpfs/norstore_trd/user/chawla/R/x86_64-unknown-linux-gnu-
library/2.15/RCurl'
The downloaded source packages are in
'/tmp/RtmpiW2q4W/downloaded_packages'
Warning messages:
1: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) :
installation of package 'RCurl' had non-zero exit status
2: installed directory not writable, cannot update packages 'Matrix',
'nlme',
'rpart', 'survival'
But I could install packages from the command biocLite() in the same
directory.
Any ideas how to solve this.
Thanks
Konika
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