On 08/31/2012 03:47 AM, deepika lakhwani wrote: > hello... > > please suggest me the R package for genome mapping of Arabidopsis, actually > i have genomic data of Arabidopsis so i want to map on it whole genome. Hi Deepika -- it's not clear what you're asking. Aligning short reads? Maybe Rsubread or in the devel version of Bioconductor gmapR. Annotations? maybe org.At.tair.db. Whole genome? one of the BSgenome.Athaliana.TAIR.* genomes at http://bioconductor.org/packages/release/BiocViews.html#___AnnotationD ata. Hope that helps, Martin > > > > regards > > deepika > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > -- Computational Biology / Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: Arnold Building M1 B861 Phone: (206) 667-2793