That was an easy fix. I usually check the package listing under HTML help when I first install new packages. The Bioconductor packages were not showing. I loaded Biobase to check command line help before I replied to you. That synchronized the packages and now all of the HTML help pages are available. Sorry to bother you. Chuck -----Original Message----- From: Jeff Gentry [mailto:jgentry@jimmy.harvard.edu] Sent: Friday, May 21, 2004 1:54 PM To: White, Charles E WRAIR-Wash DC Cc: 'bioconductor@stat.math.ethz.ch' Subject: Re: [BioC] Installing Bioconductor 1.4 Help Files > The current script is installing the packages but it is not installing the > Bioconductor help files into the R help functions. The same thing happens on > my home and office machines, both of which run WinXP. The same thing happens > for both R 1.9.0 & R 1.9.0 (patch). Help would be appreciated (... however > you would like to take it .... <grin>). Can you give more information as to what exactly you're trying to do and how exactly it isn't working? Thanks -J