package xps HG-U133-PLUS_probe.tab / .psi
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steven wink ▴ 90
@steven-wink-5440
Last seen 5.5 years ago
Hi all, To create a root scheme file I need the HG-U133-PLUS_probe.tab file ( according to script4schemes.R example code ), however from the affymetrix website I could only find the HG-U133_Plus_2.psi probe file. Can I safely rename this file? thanks in advance, Steven Wink [[alternative HTML version deleted]]
probe probe • 867 views
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@james-w-macdonald-5106
Last seen 26 minutes ago
United States
Hi Steven, On 8/6/2012 12:43 PM, steven wink wrote: > Hi all, > > To create a root scheme file I need the HG-U133-PLUS_probe.tab file ( > according to script4schemes.R example code ), however from the affymetrix > website I could only find the HG-U133_Plus_2.psi probe file. Can I safely > rename this file? I doubt it - I think that is a binary format. Anyway, the probe_tab file is there, just hard to find. http://www.affymetrix.com/analysis/downloads/data/HG- U133_Plus_2.probe_tab.zip Best, Jim > > thanks in advance, > > Steven Wink > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician University of Washington Environmental and Occupational Health Sciences 4225 Roosevelt Way NE, # 100 Seattle WA 98105-6099
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Hi James, Thanks alot for the fast reply. Best Steven 2012/8/6 James W. MacDonald <jmacdon@uw.edu> > Hi Steven, > > > On 8/6/2012 12:43 PM, steven wink wrote: > >> Hi all, >> >> To create a root scheme file I need the HG-U133-PLUS_probe.tab file ( >> according to script4schemes.R example code ), however from the affymetrix >> website I could only find the HG-U133_Plus_2.psi probe file. Can I safely >> rename this file? >> > > I doubt it - I think that is a binary format. Anyway, the probe_tab file > is there, just hard to find. > > http://www.affymetrix.com/**analysis/downloads/data/HG-** > U133_Plus_2.probe_tab.zip<http: www.affymetrix.com="" analysis="" downloa="" ds="" data="" hg-u133_plus_2.probe_tab.zip=""> > > Best, > > Jim > > > >> thanks in advance, >> >> Steven Wink >> >> [[alternative HTML version deleted]] >> >> ______________________________**_________________ >> Bioconductor mailing list >> Bioconductor@r-project.org >> https://stat.ethz.ch/mailman/**listinfo/bioconductor<https: stat.e="" thz.ch="" mailman="" listinfo="" bioconductor=""> >> Search the archives: http://news.gmane.org/gmane.** >> science.biology.informatics.**conductor<http: news.gmane.org="" gmane="" .science.biology.informatics.conductor=""> >> > > -- > James W. MacDonald, M.S. > Biostatistician > University of Washington > Environmental and Occupational Health Sciences > 4225 Roosevelt Way NE, # 100 > Seattle WA 98105-6099 > > [[alternative HTML version deleted]]
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