Installing GenomicRanges require a version of IRanges unavailable
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@duhaime-johanne-162
Last seen 10.2 years ago
Hello I am tryng to install GenomeRanges in R, svn last version, but the required version of IRanges is not available (1.13.23). Details are below. Thank you in advance > biocLite("GenomicRanges") BioC_mirror: http://bioconductor.org Using R version 2.15, BiocInstaller version 1.3.7. Installing package(s) 'GenomicRanges' Installing package(s) into '/stockage/lib64/Rdev' (as 'lib' is unspecified) Warning: dependency 'IRanges (>= 1.13.23)' is not available trying URL 'http://bioconductor.org/packages/2.10/bioc/src/contrib/Gen omicRanges_1.7.24.tar.gz' (...) ** preparing package for lazy loading Error : package 'IRanges' 1.13.22 was found, but >= 1.13.23 is required by 'GenomicRanges' ERROR: lazy loading failed for package 'GenomicRanges' * removing '/stockage/lib64/Rdev/GenomicRanges' > biocLite("IRanges") BioC_mirror: http://bioconductor.org Using R version 2.15, BiocInstaller version 1.3.7. Installing package(s) 'IRanges' Installing package(s) into '/stockage/lib64/Rdev' (as 'lib' is unspecified) trying URL 'http://bioconductor.org/packages/2.10/bioc/src/contrib/IRa nges_1.13.22.tar.gz' Content type 'application/x-gzip' length 673858 bytes (658 Kb) opened URL ================================================== downloaded 658 Kb * installing *source* package 'IRanges' ... (...) ** help *** installing help indices ** building package indices ** installing vignettes 'IRangesOverview.Rnw' 'RleTricks.Rnw' ** testing if installed package can be loaded * DONE (IRanges) Johanne Duhaime [[alternative HTML version deleted]]
IRanges BiocInstaller IRanges BiocInstaller • 1.2k views
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