HTqPCR and Biobase's eSet
1
0
Entering edit mode
An De Bondt ▴ 40
@an-de-bondt-3329
Last seen 8.2 years ago
Dear Heidi, Based on the conversation on class "qPCRset" and the suggestion of having phenoData included, I think that's a great idea! I was even wondering whether pData(featureData(qPCRset)) would be a slot of interest as well to include to the qPCRset object. I learned that you have already featureType(dat) featurePos(dat) featureClass(dat) Each of these are currently vectors and could actually be columns of pData(featureData(qPCRset)). This is how it has been implemented for expressionSets, I think. Do you think this could be of interest to a broader community as well? Thanks in advance for your consideration. Best, An [[alternative HTML version deleted]]
• 910 views
ADD COMMENT
0
Entering edit mode
Heidi Dvinge ★ 2.0k
@heidi-dvinge-2195
Last seen 10.2 years ago
Hi An, > Dear Heidi, > > Based on the conversation on class "qPCRset" and the suggestion of > having phenoData included, I think that's a great idea! I was even > wondering whether pData(featureData(qPCRset)) would be a slot of > interest as well to include to the qPCRset object. I learned that you > have already > featureType(dat) > featurePos(dat) > featureClass(dat) > Each of these are currently vectors and could actually be columns of > pData(featureData(qPCRset)). This is how it has been implemented for > expressionSets, I think. > > Do you think this could be of interest to a broader community as well? > Thanks for the feedback. With one more vote cast in for letting qPCRset inheret from ExpressionSet (and hence phenoData), this does indeed seem to be the way for me to go. I'll have a look at updaying this for the next Bioconductor release. Best \Heidi > Thanks in advance for your consideration. > > Best, > An >
ADD COMMENT

Login before adding your answer.

Traffic: 824 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6