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Liu,Bin
▴
50
@liubin-4866
Last seen 10.3 years ago
Hi, I am trying to download the XML package that is required for
"GenomicFeatures" package. However, I got following error message.
It seems that the gz file couldn't be downloaded. Whenever the
downloading reached 751kb, an error was displayed.I am using R2.14.0
devel version.
It works for other packages. Thanks
Bin
Bin Liu, Ph.D.
Assistant Professor
Department of Genetics
The University of Texas M. D. Anderson Cancer Center
1515 Holcombe Blvd
Houston, TX 77030
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> biocLite("XML")
BioC_mirror = 'http://www.bioconductor.org', change using
chooseBioCmirror().
Using R version 2.14, BiocInstaller version 1.1.27.
Installing package(s) 'XML'
Installing package(s) into ?/home/abc001/R/i686-pc-linux-gnu-
library/2.14?
(as ?lib? is unspecified)
trying URL 'http://cran.fhcrc.org/src/contrib/XML_3.4-3.tar.gz'
Content type 'application/x-gzip' length 906364 bytes (885 Kb)
opened URL
==========================================
downloaded 751 Kb
Error in untar2(tarfile, files, list, exdir) : incomplete block on
file
The downloaded packages are in
?/tmp/Rtmpn6rDdk/downloaded_packages?
Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
downloaded length 769652 != reported length 906364
2: In install.packages(pkgs = pkgs, repos = repos, ...) :
installation of package ?XML? had non-zero exit status