Thanks Sean. I just realized that I hadn't acknowledged your response. My apologies. Thanks again. Avoks On Fri, Sep 16, 2011 at 6:31 PM, Sean Davis <sdavis2 at="" mail.nih.gov=""> wrote: > There is not a way to get this information from R or from the website, > for that matter. ?That said, you can download the data and perform > local calculations using R. ?See the GEOquery package for the > "download" part and the limma package, for example, for the analysis > side of things. > > Sean > > > On Fri, Sep 16, 2011 at 9:59 AM, Ovokeraye Achinike-Oduaran > <ovokeraye at="" gmail.com=""> wrote: >> Hi, >> >> I don?t even know if this is remotely possible but I just thought I >> should take a chance. ?On the GDS record pages in GEO, there is an >> analysis tools button. Clicking on this gives the option of finding >> genes that are up/down for the condition in the dataset, I believe. >> The result however does not indicate which is up or down >> regulated...at least I can?t seem to find where it shows that. Is it >> possible to somehow retrieve this information on up- and down- >> regulated genes in with R? >> >> Thanks. >> >> Avoks >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at r-project.org >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >> >