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Mary Ellen Fitzpatrick
▴
20
@mary-ellen-fitzpatrick-4835
Last seen 10.2 years ago
Hi,
I have installed R-2.12.2 on my linux system and have installed
various
biocondutor (verison 2.5.11) packages without issue.
However, I am trying to install the bioconductor package BayesPeak and
it requires bioconductor version 2.6 or later
How do I upgrade the Bioconductore package?
I have run:
|source("http://bioconductor.org/biocLite.R")
update.packages(repos=biocinstallRepos(), ask=FALSE, checkBuilt=TRUE)
|
But it did not resolve the issue.
I also ran
|biocLite()
|
But it just pulls/downloads packages from bioconductor/packages/2.5
dir.... how do I change this.
--
Thanks
Mary Ellen
Mary Ellen FitzPatrick
Systems Analyst
Bioinformatics
Boston University
24 Cummington St.
Boston, MA 02215
office 617-358-2771
cell 617-797-7856
mfitzpat at bu.edu