Or does he mean the estimated array-wide correlation coefficient coming out of ?duplicateCorrelation. The question is poorly worded. Kasper On Thu, Aug 18, 2011 at 7:15 AM, Wolfgang Huber <whuber at="" embl.de=""> wrote: > Aug/15/11 9:13 PM, Michael Considine scripsit:: >> >> Hi, I need to compute the correlation coefficient for expression data >> from the results of an eBayes result from a continuous variable >> linear model run with limma. ?I have thus far not been able to locate >> documentation on how to achieve this, and any assistance would be >> greatly appreciated. >> > > Michael > > this is a basic R question. You might save yourself a lot of confusion from > reading the free "Introduction to R" [1]. More specifically, try typing > > ? ? ? ?? cor > > into the R command line. > > [1] http://cran.r-project.org/doc/manuals/R-intro.html > > Best wishes > ? ? ? ?Wolfgang > > -- > > > Wolfgang Huber > EMBL > http://www.embl.de/research/units/genome_biology/huber > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor >