how to find kinases and their phosphorylating target
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Ed ▴ 230
@ed-4683
Last seen 10.2 years ago
Hi there, Is there a way in bioconductor to find kinases and their phosphorylating targets? Apologize if it is a little bit off topic. Thanks, Ed [[alternative HTML version deleted]]
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@sean-davis-490
Last seen 3 months ago
United States
On Wed, Jun 15, 2011 at 12:10 PM, Ed <edforum at="" gmail.com=""> wrote: > Hi there, > > Is there a way in bioconductor to find kinases and their phosphorylating > targets? Apologize if it is a little bit off topic. Kinases are relatively easy. Try GO: GO:0016301 [Kinase Activity] As for their phosphorylation targets, I don't know of a comprehensive resource outside of Bioconductor so there won't be one within Bioconductor. Sean
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I probably should put "besides GO" :). But thanks a lot! Do you think PPI database or some kinase databases outside might work? I am kinda searching them these days. Ed On Wed, Jun 15, 2011 at 11:18 AM, Sean Davis <sdavis2@mail.nih.gov> wrote: > On Wed, Jun 15, 2011 at 12:10 PM, Ed <edforum@gmail.com> wrote: > > Hi there, > > > > Is there a way in bioconductor to find kinases and their phosphorylating > > targets? Apologize if it is a little bit off topic. > > Kinases are relatively easy. Try GO: > > GO:0016301 [Kinase Activity] > > As for their phosphorylation targets, I don't know of a comprehensive > resource outside of Bioconductor so there won't be one within > Bioconductor. > > Sean > [[alternative HTML version deleted]]
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