Dear bioconductors, I would like produce a table of agilent array annotation from the following db package; ls("package:mgug4120a.db") I was wondering if there is a way to dump all probes and a selected set of annotation for the probes. Probes that are missing annotation are still reported but with no annotation. Thank you for any help on this. [[alternative HTML version deleted]]

Hi John, Maybe you wanted to do something like this?: head(toTable(mgug4120aCHR)) If this doesn't answer your question can you pleae be a bit more specific about what you want? It's pretty hard to know (from this end) if you don't spell it out for us pretty explicitly. Marc On 05/31/2011 03:52 AM, john herbert wrote: > Dear bioconductors, > I would like produce a table of agilent array annotation from the following > db package; > ls("package:mgug4120a.db") > > I was wondering if there is a way to dump all probes and a selected set of > annotation for the probes. Probes that are missing annotation are still > reported but with no annotation. > > > Thank you for any help on this. > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor