Entering edit mode
Chao-Jen Wong
▴
580
@chao-jen-wong-3603
Last seen 9.9 years ago
USA/Seattle/Fred Hutchinson Cancer Reseā¦
Hi, Gabriel,
The iFlow package has not been able to built before we release BioC
2.7, so we took it out of the branch. We are, however, trying to fix
the bugs such that it can be put back to the development branch (2.8)
as soon as possible. Meanwhile, we will change the maintainer's email
address. Thanks for noticing the defunct address. I will get back to
you as soon as the package can be built again.
Thanks,
Chao-Jen
----- Original Message -----
From: "Gabriel Nathan Kaufman, Mr" <gabriel.kaufman@mail.mcgill.ca>
To: bioconductor at r-project.org
Sent: Monday, January 31, 2011 12:08:11 PM
Subject: [BioC] iFlow and current Bioconductor release
I recently tried to install the iFlow flow cytometry GUI on top of my
R/Bioconductor installation, and received a warning message that the
package was not available (R console output copied below). The e-mail
address of the maintainer appears to be defunct.
Furthermore, a binary is available on the webpage for Bioconductor
2.6, but there is no page in the listing of packages for the release
version of Bioconductor (2.7) or the development version (2.8).
Has this package been quietly completely discontinued? Or is there
some other way to obtain it?
Gabriel Kaufman
McGill University Complex Traits Group
-------------------------------------
> source("http://bioconductor.org/biocLite.R")
BioC_mirror = http://www.bioconductor.org
Change using chooseBioCmirror().
> biocLite("iFlow")
Using R version 2.12.1, biocinstall version 2.7.4.
Installing Bioconductor version 2.7 packages:
[1] "iFlow"
Please wait...
Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
package ?iFlow? is not available
> sessionInfo()
R version 2.12.1 (2010-12-16)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] en_CA.UTF-8/en_CA.UTF-8/C/C/en_CA.UTF-8/en_CA.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods
[7] base
loaded via a namespace (and not attached):
[1] tools_2.12.1
_______________________________________________
Bioconductor mailing list
Bioconductor at r-project.org
https://stat.ethz.ch/mailman/listinfo/bioconductor
Search the archives:
http://news.gmane.org/gmane.science.biology.informatics.conductor
--
Chao-Jen Wong
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Avenue N., M1-B514
PO Box 19024
Seattle, WA 98109
206.667.4485
cwon2 at fhcrc.org