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oleg@stat.berkeley.edu
▴
20
@olegstatberkeleyedu-4310
Last seen 10.1 years ago
Hi, all
I want to use genome package corresponding to TAIR9 version of
a.thaliana
genome. It seems that BSgenome makes 2 genome versions available:
"BSgenome.Athaliana.TAIR.01222004" and
"BSgenome.Athaliana.TAIR.04232008".
After checking them out, they actually seem to be the same and
represent
an earlier version of the genome (TAIR8?). I could probably try to put
together TAIR9 genome using BSgenome manual, but I thought there might
be
a package out there already, since TAIR9 has been around for a while
now
(TAIR10 has been released last month). If someone knows of one, please
let
me know!
Oleg.