Entering edit mode
Kathleen,
Please refer to the discussion at
http://permalink.gmane.org/gmane.science.biology.informatics.conductor
/30115
. Thanks!
Best regards,
Julie
On 10/26/10 11:52 AM, "Kathleen O'Hagan" <kathleen.ohagan at="" qub.ac.uk=""> wrote:
> Dear Dr. Zhu
>
> I am currently using the ChIPpeakAnno bioconductor package to
annotated
> Chip-seq data. I have 1 sample that have been immunoprecipitated
with 2
> different antibodys for 2 different histone modifications. I am
interested in
> indentifing genes that have both histone marks. I am interesred in
your
> "makeVennDiagram" code. My question is- how is the "totalTest"
parameter
> defined? Is it the total number of peaks in the file with the most
peaks?
>
> Kind regards
>
> Kathleen O'Hagan