how do I simply print out all the probes, refeq ids, unigenes id, chromosomes location etc on the chip "Affymetrix Human Gene 1.0-ST Probeset Array" using bioconductor and using "hugene10stprobeset.db". also are there detailed tutorials on how to do this cause I looked for hours and couldnt find anything. Thanks for everyones help in advance

Hi David, Sorry to hear you had such a hard time finding help. You can see the vignette for the AnnotationDbi package here: http://www.bioconductor.org/packages/release/bioc/vignettes/Annotation Dbi/inst/doc/AnnotationDbi.pdf And from R: library("hugene10stprobeset.db") openVignette() Then just choose the number for the AnnotationDbi vignette that you want to read about. Marc On 05/17/2010 09:35 PM, David Lyon wrote: > how do I simply print out all the probes, refeq ids, unigenes id, chromosomes location etc on the chip > "Affymetrix Human Gene 1.0-ST Probeset Array" using bioconductor and using "hugene10stprobeset.db". > > also are there detailed tutorials on how to do this cause I looked for hours and couldnt find anything. > > > Thanks for everyones help in advance > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > >