Fahim, The IRanges package has grown a fair amount since the BioC 2.4 release, which operates on R 2.9.z. Please upgrade to the latest release of R (R 2.11.0) and BioC 2.6. The current version number for IRanges is 1.6.1. Cheers, Patrick On 5/7/10 12:06 PM, Fahim Md wrote: > > seqselect(xSnippet, start = c(6, 1), end = c(10, 5)) > Error: could not find function "seqselect" > > sessionInfo() > R version 2.9.2 (2009-08-24) > x86_64-pc-linux-gnu > > locale: > LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_ US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC _NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDEN TIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] IRanges_1.2.3 > > > > > > On Fri, May 7, 2010 at 1:09 PM, Patrick Aboyoun <paboyoun@fhcrc.org> <mailto:paboyoun@fhcrc.org>> wrote: > > Fahim, > I changed the subject of your e-mail to match what you have > experienced. There are two reasons why you did not find the > seqselect symbol: > > 1) The IRanges package wasn't loaded onto your search patch > 2) You are using an older version of IRanges the predates the > inclusion of seqselect > > Could you send the results of sessionInfo()? This will help us > determine which of the two categories you fell into. > > > Cheers, > Patrick > > > > On 5/6/10 8:16 PM, Fahim Md wrote: >> Hi >> I was playing with package IRanges and I think 'seqselect()' is somehow not >> working. >> >> >>> seqselect(xSnippet, start = c(6, 1), end = c(10, 5)) >>> >> Error: could not find function "seqselect" >> >>> seqSelect(xSnippet, start = c(6, 1), end = c(10, 5)) >>> >> Error: could not find function "seqSelect" >> >>> help('seqselect') >>> >> No documentation for 'seqselect' in specified packages and libraries: >> >>> ??seqselect >>> >> No help files found with alias or concept or title matching ‘seqselect’ >> using fuzzy matching. >> >>> >> Thanks for building such a nice package. >> Regards >> >> >> >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor@stat.math.ethz.ch <mailto:bioconductor@stat.math.ethz.ch> >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives:http://news.gmane.org/gmane.science.biology .informatics.conductor > > > > > -- > Mohammad Fahim > Louisville, KY, USA > Ph: +1-502-409-1167 [[alternative HTML version deleted]]