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Warnes, Gregory R
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@warnes-gregory-r-43
Last seen 10.2 years ago
I have create a standard Bioconductor package from John Storey's
q-value
code. It is available at
http://www.bioconductor.org/repository/devel/package/html/qvalue.html.
Description:
This package takes a list of p-values resulting from the simultaneous
testing of many hypotheses and estimates their q-values. The q-value
of a
test measures the proportion of false positives incurred (called the
false
discovery rate) when that particular test is called significant. A
short
tutorial on q-values and false discovery rates is provided with the
manual.
Various plots are automatically generated, allowing one to make
sensible
significance cut-offs. Several mathematical results have recently been
shown
on the conservative accuracy of the estimated q-values from this
software.
The software can be applied to problems in genomics, brain imaging,
astrophysics, and data mining.
Version: 1.0.0
Author: John D. Storey. R packaging by Gregory R. Warnes Maintainer:
Gregory
R. Warnes
Dependencies: NA
SystemRequirements: NA
License: Please send the original author, John D. Storey an email with
"qvalue download" in the subject line.
LEGAL NOTICE\ Unless expressly stated otherwise, this
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