Error in reading CEL files
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@niccolo-bassani-3933
Last seen 10.2 years ago
Dear Bioconductor users, I'm facing kind of a trivial problem with importing a cel file in Bioconductor. I guess there is some problem in the original .CEL files, but I'm not that sure. Here's the code, and the error message... ReadAffy("aA2780sc1.cel") Errore in read.celfile.header(filenames[[1]]) : Calloc non può allocare memoria (1819626853 di 1) I really do not know where to turn... Thanks in advance Niccolò [[alternative HTML version deleted]]
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@wolfgang-huber-3550
Last seen 3 months ago
EMBL European Molecular Biology Laborat…
Dear Niccol? thank you for the compliment and thinking that we are clairvoyants, but I am sorry to have to tell you that we are not. If you woud like a useful response, please provide a reasonably precise question. This includes following the posting guide, in particular, providing the output of "sessionInfo()" and a self-contained code example that can be reproduced by others (and in your case, that might imply posting the CEL file somewhere on the internet). And then of course the obvious - have you made sure your computer has enough memory for what you want to do with it? Best wishes Wolfgang Niccol? Bassani scripsit 02/16/2010 05:45 PM: > Dear Bioconductor users, > I'm facing kind of a trivial problem with importing a cel file in > Bioconductor. I guess there is some problem in the original .CEL files, but > I'm not that sure. Here's the code, and the error message... > > ReadAffy("aA2780sc1.cel") > > Errore in read.celfile.header(filenames[[1]]) : > Calloc non pu? allocare memoria (1819626853 di 1) > > I really do not know where to turn... > > Thanks in advance > Niccol? > > [[alternative HTML version deleted]] > > > > -------------------------------------------------------------------- ---- > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Best wishes Wolfgang -- Wolfgang Huber EMBL http://www.embl.de/research/units/genome_biology/huber/contact
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