Hi, Bring your microarray data to GeneMesh and query them for various diseases category and other biological phenomena. Its free for public to use and uses R/BioC on back..!! we are in process of publishing paper. GeneMesh uses full breath of NCBI MeSH database + NCBI Pubmed + NCBI Gene databases. (pathway heatmaps of Diseases related genes , Gene- Gene Interactiosn, Ontolgoy and much more) http://proteogenomics.musc.edu/genemesh/ If anyone have questions/comments, please let me know. Saurin ----- Original Message ---- From: Gilbert Feng <g-feng@northwestern.edu> To: Alberto Goldoni <alberto.goldoni1975 at="" gmail.com="">; BioC <bioconductor at="" stat.math.ethz.ch=""> Sent: Tue, February 16, 2010 11:07:08 AM Subject: Re: [BioC] gene vs disease Hi, Alberto Disease Ontology ( http://do-wiki.nubic.northwestern.edu/index.php/Main_Page) has a lite version integrated in GeneAnswers. You may be interested in that. Thanks Gilbert On 2/16/10 8:44 AM, "Alberto Goldoni" <alberto.goldoni1975 at="" gmail.com=""> wrote: > Dear all, > there is the possibility with bioconductor if i have a list of gene > (affiID,....) to know if this gene are involved in a disease: for > example cardiovascular disease? > > Best regards. ----------------------------------------------- Gang (Gilbert) Feng, PhD Biomedical Informatics Center Robert H. Lurie Comprehensive Cancer Center Northwestern University 750 N. Lake Shore Drive, 11th Floor(11-175e) Chicago, IL 60611 Phone:312-503-2358 Email g-feng (at) northwestern.edu _______________________________________________ Bioconductor mailing list Bioconductor at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor