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sneha patil
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220
@sneha-patil-3903
Last seen 10.2 years ago
hii,
Myself Sneha....
*I am creating own chip CDF and probe package file with a window R
*2.0.1
>* version.
*>*
*>* The make.cdf.package works fine,
*>*
*make.cdf.package("HuGene-1_0-st-v1.r3.cdf", species =
"Homosapiens_sp")
Reading CDF file.
Creating CDF environment
Wait for about 323
dots..................................................................
......................................................................
......................................................................
......................................................................
..........................................
Creating package in C:/Users/neurooncolab new
pc/Documents/R/win-library/2.10/hugene10stv1.r3cdf
README PLEASE:
A source package has now been produced in
C:/Users/neurooncolab new
pc/Documents/R/win-library/2.10/hugene10stv1.r3cdf.
Before using this package it must be installed via 'R CMD INSTALL'
at a terminal prompt (or DOS command shell).
If you are using Windows, you will need to get set up to install
packages.
See the 'R Installation and Administration' manual, specifically
Section 6 'Add-on Packages' as well as 'Appendix E: The Windows
Toolset'
for more information.
Alternatively, you could use make.cdf.env(), which will not require
you to
install a package.
However, this environment will only persist for the current R session
unless you save() it.
> Rcmd install hugene10stv1.r3cdf
Error: unexpected symbol in "Rcmd install"
> R CMD INSTALL hugene10stv1.r3cdf
Error: unexpected symbol in "R CMD"
> RCMD INSTALL hugene10stv1.r3cdf
Error: unexpected symbol in "RCMD INSTALL"
> hugene10stv1.r3 = make.cdf.env("HuGene-1_0-st-v1.r3.cdf")
Reading CDF file.
Creating CDF environment
Wait for about 323 dots..................>* *
**
*Okkk but now i am getting the following error *
**
> library(hugene10stv1.r3cdf)
Error in library(hugene10stv1.r3cdf) :
'hugene10stv1.r3cdf' is not a valid installed package
*
*>* I have tried google, but can not get the right solution. Could any
one
*>* help me to solve the trouble?
*>* Thanks a lot!
*
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