Regardin GCRMA normalization
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sneha patil ▴ 220
@sneha-patil-3903
Last seen 10.2 years ago
hii, Myself Sneha.... *I am creating own chip CDF and probe package file with a window R *2.0.1 >* version. *>* *>* The make.cdf.package works fine, *>* *make.cdf.package("HuGene-1_0-st-v1.r3.cdf", species = "Homosapiens_sp") Reading CDF file. Creating CDF environment Wait for about 323 dots.................................................................. ...................................................................... ...................................................................... ...................................................................... .......................................... Creating package in C:/Users/neurooncolab new pc/Documents/R/win-library/2.10/hugene10stv1.r3cdf README PLEASE: A source package has now been produced in C:/Users/neurooncolab new pc/Documents/R/win-library/2.10/hugene10stv1.r3cdf. Before using this package it must be installed via 'R CMD INSTALL' at a terminal prompt (or DOS command shell). If you are using Windows, you will need to get set up to install packages. See the 'R Installation and Administration' manual, specifically Section 6 'Add-on Packages' as well as 'Appendix E: The Windows Toolset' for more information. Alternatively, you could use make.cdf.env(), which will not require you to install a package. However, this environment will only persist for the current R session unless you save() it. > Rcmd install hugene10stv1.r3cdf Error: unexpected symbol in "Rcmd install" > R CMD INSTALL hugene10stv1.r3cdf Error: unexpected symbol in "R CMD" > RCMD INSTALL hugene10stv1.r3cdf Error: unexpected symbol in "RCMD INSTALL" > hugene10stv1.r3 = make.cdf.env("HuGene-1_0-st-v1.r3.cdf") Reading CDF file. Creating CDF environment Wait for about 323 dots..................>* * ** *Okkk but now i am getting the following error * ** > library(hugene10stv1.r3cdf) Error in library(hugene10stv1.r3cdf) : 'hugene10stv1.r3cdf' is not a valid installed package * *>* I have tried google, but can not get the right solution. Could any one *>* help me to solve the trouble? *>* Thanks a lot! * [[alternative HTML version deleted]]
cdf probe cdf probe • 996 views
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