Hi all, Has anyone already created a BioC-compatible CDF file for Affymetrix' GeneChip miRNA array? If so, are you willing to share this with me? Since i have never done so myselves, this would save me from creating such file and all potential pitfalls that *may* occur... :) http://www.affymetrix.com/products_services/arrays/specific/mi_rna.aff x# 1_4 Thanks, Guido ------------------------------------------------ Guido Hooiveld, PhD Nutrition, Metabolism & Genomics Group Division of Human Nutrition Wageningen University Biotechnion, Bomenweg 2 NL-6703 HD Wageningen the Netherlands tel: (+)31 317 485788 fax: (+)31 317 483342 internet: http://nutrigene.4t.com <http: nutrigene.4t.com=""/> email: guido.hooiveld@wur.nl [[alternative HTML version deleted]]

Hello all, I already did create such a file from the Affymetrix provided CDF- file. Just drop a line if you're interested. Regards, Dr. Philip de Groot Ph.D. Bioinformatics Researcher Wageningen University / TIFN Nutrigenomics Consortium Nutrition, Metabolism & Genomics Group Division of Human Nutrition PO Box 8129, 6700 EV Wageningen Visiting Address: Erfelijkheidsleer: De Valk, Building 304 Dreijenweg 2, 6703 HA Wageningen Room: 0052a T: +31-317-485786 F: +31-317-483342 E-mail: Philip.deGroot at wur.nl <mailto:philip.degroot at="" wur.nl=""> Internet: http://www.nutrigenomicsconsortium.nl <http: www.nutrigenomicsconsortium.nl=""/> http://humannutrition.wur.nl <http: humannutrition.wur.nl=""/> https://madmax.bioinformatics.nl <https: madmax.bioinformatics.nl=""/> ________________________________ From: Hooiveld, Guido Sent: Wed 22/07/2009 09:01 PM To: bioconductor at stat.math.ethz.ch Subject: [BioC] CDF file for Affy GeneChip miRNA array Hi all, Has anyone already created a BioC-compatible CDF file for Affymetrix' GeneChip miRNA array? If so, are you willing to share this with me? Since i have never done so myselves, this would save me from creating such file and all potential pitfalls that *may* occur... :) http://www.affymetrix.com/products_services/arrays/specific/mi_rna.aff x# 1_4 Thanks, Guido ------------------------------------------------ Guido Hooiveld, PhD Nutrition, Metabolism & Genomics Group Division of Human Nutrition Wageningen University Biotechnion, Bomenweg 2 NL-6703 HD Wageningen the Netherlands tel: (+)31 317 485788 fax: (+)31 317 483342 internet: http://nutrigene.4t.com <http: nutrigene.4t.com=""/> <http: nutrigene.4t.com=""/> email: guido.hooiveld at wur.nl [[alternative HTML version deleted]]