Entering edit mode
carissimo@tigem.it
▴
30
@carissimotigemit-3363
Last seen 10.3 years ago
Dear all,
j'm using the library xps in order to analyse some .cel file from
Human
Gene 1.0 st.
J have the Scheme for the chip and the Root Tree for the Cel files,
when J
use the RMA method to compute expression levels, in the output file j
have
only 25927 records instead of 33297 that is the total number of
transcript units.
J used this instruction
data.rma<-
rma(data.banfi,"DataRma",filedir=datadir,tmpdir="",background="antigen
omic",
normalize=T,exonlevel="metacore+affx")
Where is the problem?
Thank you
Annamaria Carissimo
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