Gene ontology Id number to amigo link
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Tim Smith ★ 1.1k
@tim-smith-1532
Last seen 10.5 years ago
Hi All, I probably missed it, but is there a package/function that would give a link to a GO term from a GO ID? For example, I have a list of GO IDs (GO:0006996) and want to have a set of hyperlinks that would take the user to a detailed webpage for this ID (e.g. geneOntology/GO0006996). Is there any package/function that would do this? I checked GOstats and GO, but couldn't find anything. thanks! [[alternative HTML version deleted]]
GO GOstats GO GOstats • 931 views
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@sean-davis-490
Last seen 14 days ago
United States
On Sun, Oct 5, 2008 at 11:34 AM, Tim Smith <tim_smith_666 at="" yahoo.com=""> wrote: > Hi All, > > I > probably missed it, but is there a package/function that would give a > link to a GO term from a GO ID? For example, I have a list of GO IDs (GO:0006996) and want to have a set of hyperlinks that would take the user to a detailed webpage for this ID (e.g. geneOntology/GO0006996). Is there any package/function that would do this? > > I checked GOstats and GO, but couldn't find anything. No, but creating such a function is a one-liner. goURL <- function(term) {paste('http://amigo.geneontology.org/cgi-bin/amigo/term- details.cgi?term=',term,sep="")} Hope that helps. Sean
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