dear group, when i use GOstats, i get some terms as over represented for my set of genes. I am interested now in getting those specific genes responsible for enrichment of a term. How can i obtain those genes. more clearly, i have a set of differentially expressed genes, i did GOstats for obtaining biological processes terms. I see that i got 10 terms that are significant below 0.01 of p-value. now of these 10 categories, I see 'oocyte maturation' ( 9 genes out of 50 are there). how can i get those 9 genes that have these term annotated to. Thanks for your suggestion. srini ________________________________________________________________ ____________________ Be a better friend, newshound, and

Hi Srini, ?probeSetSummary Best, Jim Srinivas Iyyer wrote: > dear group, > > when i use GOstats, i get some terms as over > represented for my set of genes. I am interested now > in getting those specific genes responsible for > enrichment of a term. How can i obtain those genes. > > more clearly, i have a set of differentially > expressed genes, i did GOstats for obtaining > biological processes terms. I see that i got 10 terms > that are significant below 0.01 of p-value. > > now of these 10 categories, I see 'oocyte maturation' > ( 9 genes out of 50 are there). how can i get those 9 > genes that have these term annotated to. > > Thanks for your suggestion. > > srini > > > ______________________________________________________________ ______________________ > Be a better friend, newshound, and > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623