EBImage installation error
0
0
Entering edit mode
@klaus-peter-pleissner-1790
Last seen 10.3 years ago
Hello I have downloaded gtk-dev-2.10.11-win32-1.exe and installed GTK under C:\GTK. Then I installed ImageMagick-6.3.8-Q16 The path variable is : PATH=C:\GTK\bin;C:\GTK\lib;d:\programme\imagemagick-6.3.8-q16;C:\WINDO WS\system32 Then I installed EBImage_2.2.0.zip within R-GUI using Packages -> Install packages from local zip files >library(EBImage) gives following error (in German): Der Prozedureinsprungspunkt "atk_relation_add_target" wurde in der DLL"libatk-1.0-0.dll" nicht gefunden . In English: The procedure entry point "atk_relation_add_target" was not found in DLL "libatk-1.0-0.dll" Can you give me a hint to solve this problem, please ? Regards Klaus-Peter P.S. I have read the EBImage installation HOWTO $version.string [1] "R version 2.6.0 (2007-10-03)" Oleg Sklyar wrote: > Dear Jian, > > This is not EBImage error, but GTK configuration error, which is > independent on the package: the package fails to find one of the most > basic GTK libraries that are required for its proper functioning. > > The package requires at least 2 dependencies that must be installed > separately on Windows. biocLite does not do that because those are not > R, but system dependencies. GTK containing GDK is one of those. > Unfortunately, often people use biocLite without thinking that many > packages require system-level dependencies, which are not installed and > biocLite does not warn about it. > > Have you checked the installation manual for the package? Please check > this manual, ensure that everything what is in there is done. If it > still does not work check if {GTK}\lib is in your PATH along with > {GTK}\bin. > > If this all does not help, please post more details: versions of R, > EBImage, GTK, ImageMagick that you are trying to use; the contents of > your PATH variable in part concerning GTK and ImageMagick > > Best, > Oleg > > > Yuan Jian wrote: > >> Hello, >> >> I have installed EBImage in windows XP: >> > source("http://www.braju.com/R/hbLite.R") >> > biocLite("EBImage") >> >> but when I do >> >library(EBImage) >> the following error message box appeared: >> "This application has failed to start because libgdk- win32-2.0-0.dll was not found, >> Re-installing the application may fix this problem." >> >> I re-installed, the problem still is there. >> can you help me to solve the problem? >> >> >> >> >> >> >> >> >> "alex lam (RI)" <alex.lam at="" bbsrc.ac.uk=""> wrote: >> Dear BioC users, >> >> I am going to use the custom CDF released by MBNI for the array rae230a. >> Does anyone know of any methods / webpage for getting basic statistics >> such as how many probesets did not match ensembl, how many probes were >> removed because of SNPs ... etc? >> >> Many thanks, >> Alex >> -------------------------------------------- >> Alex C. Lam >> Roslin Institute (Edinburgh) >> Midlothian >> EH25 9PS >> United Kingdom >> Tel: +44 131 5274471 >> >> Roslin Institute is a company limited by guarantee, registered in >> Scotland (registered number SC157100) and a Scottish Charity (registered >> number SC023592). Our registered office is at Roslin, Midlothian, EH25 >> 9PS. VAT registration number 847380013. >> >> The information contained in this e-mail (including any attachments) is >> confidential and is intended for the use of the addressee only. The >> opinions expressed within this e-mail (including any attachments) are >> the opinions of the sender and do not necessarily constitute those of >> Roslin Institute (Edinburgh) ("the Institute") unless specifically >> stated by a sender who is duly authorised to do so on behalf of the >> Institute >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >> >> >> >> --------------------------------- >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > -- Mit freundlichen Gr?ssen / Best regards Dr. Klaus-Peter Pleissner Max Planck Institute for Infection Biology Core Facility Bioinformatics Charit?platz 1 D-10117 Berlin Germany *Phone:* +49-30-28460-119 *Fax:* +49-30-28460-507 *URL:* http://web.mpiib-berlin.mpg.de/bioinformatik <http: web="" .mpiib-berlin.mpg.de="" bioinformatik=""/> *Email:* pleissner at mpiib-berlin.mpg.de <mailto:pleissner at="" mpiib-="" berlin.mpg.de="">
cdf EBImage cdf EBImage • 916 views
ADD COMMENT

Login before adding your answer.

Traffic: 442 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6