Creating base file for AnnBuilder
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@deepa-rajamani-2620
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Marc Carlson ★ 7.2k
@marc-carlson-2264
Last seen 8.6 years ago
United States
Deepa Rajamani wrote: > Hi, > > I am trying to build annotation package for custom array gnGNF1Ba. I need help with getting the base file for AnnBuilder package. How do I map affy probe IDs in this array to GenBank accession numbers. > > Thanks a million for any help. > > Deepa Rajamani > > > --------------------------------- > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > > Hi Deepa, I am afraid that I am a little unclear about what you are asking. If you mean that you need help getting the probes matched to an appropriate ID (like GenBank or Entrez Gene) then I am at a little bit of a loss since I need to know first what information you actually even have about the probes on your chip. It might be helpful if you read the posting guide which can be found here: http://www.bioconductor.org/docs/postingGuide.html In particular, it would be very helpful to know very specifically what you have tried and where you are stumped. And it's also usually a good idea to post what your R sessionInfo() information is. Thanks, Marc
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