Dear colleagues, this is an off-topic, but I guess some of you could help me. I want to test some method with a dataset containing gene expression data for different normal tissues and tumors. I found normal tissue data at: http://symatlas.gnf.org/SymAtlas/ and cancer data at: http://discover.nci.nih.gov/cellminer/ But I found no dataset containing both kinds of data. And I do not know If it is possible to combine those datasets or, preferably, if there is some already available dataset containing both normal and cancer data. Thank you in advance, Federico

You could http://home.ccr.cancer.gov/oncology/oncogenomics/ Son, C.G., Bilke, S., Davis, S., Greer, B.T., Wei, J.S., Whiteford, C.C., Chen, Q.-R., Cenacchi, N., Khan, J. 2005. Database of mRNA gene expression profiles of multiple human organs. Genome Res 15: 443-450 Hope this helps Narendra >>> Federico Abascal <fabascal at="" cnb.uam.es=""> 18/01/2008 13:54:57 >>> Dear colleagues, this is an off-topic, but I guess some of you could help me. I want to test some method with a dataset containing gene expression data for different normal tissues and tumors. I found normal tissue data at: http://symatlas.gnf.org/SymAtlas/ and cancer data at: http://discover.nci.nih.gov/cellminer/ But I found no dataset containing both kinds of data. And I do not know If it is possible to combine those datasets or, preferably, if there is some already available dataset containing both normal and cancer data. Thank you in advance, Federico _______________________________________________ Bioconductor mailing list Bioconductor at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor

Quoting Federico Abascal <fabascal at="" cnb.uam.es="">: > Dear colleagues, > > this is an off-topic, but I guess some of you could help me. > > I want to test some method with a dataset containing gene expression > data for different normal tissues and tumors. > I found normal tissue data at: http://symatlas.gnf.org/SymAtlas/ > and cancer data at: http://discover.nci.nih.gov/cellminer/ > > But I found no dataset containing both kinds of data. And I do not know > If it is possible to combine those datasets or, preferably, if there is > some already available dataset containing both normal and cancer data. > > Thank you in advance, > Federico Hola Federico, have you tried www.oncomine.org? I *think* you may find what you want there... Jose -- Dr. Jose I. de las Heras Email: J.delasHeras at ed.ac.uk The Wellcome Trust Centre for Cell Biology Phone: +44 (0)131 6513374 Institute for Cell & Molecular Biology Fax: +44 (0)131 6507360 Swann Building, Mayfield Road University of Edinburgh Edinburgh EH9 3JR UK -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.