bead level data, readIllumina
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@marianthiemearcorde-2431
Last seen 10.2 years ago
Hello, did trying the beadarray package and still didnt manage to read in the raw data files. readIllumina(path="/path/to/beadarray/experiment/", textType=".csv") it complains: Fehler in readIllumina(path = "/path/to/beadarray/experiment/", : No tiffs found I am sure that 8 tif files are in the directory. And on the other hand I got the following working: readIllumina(path="/path/to/beadarray/experiment/", textType=".csv", useImages = FALSE) but I would like to let to analyse beadarray all the tiffs, Anybody know what the problem might be ? Regards, Marian ohne Zeit- und Volumenbegrenzung? DAS TOP ANGEBOT F?R ALLE NEUEINSTEIGER f?r clevere Doppel-Sparer, nur 34,95 ? inkl. DSL- und ISDN- Grundgeb?hr!
beadarray beadarray • 1.3k views
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Matt Ritchie ▴ 460
@matt-ritchie-2048
Last seen 10.2 years ago
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@marianthiemearcorde-2431
Last seen 10.2 years ago
> If you type > >dir(path="/path/to/beadarray/experiment/", pattern=".tif") > >do you get a list of your 8 tif files? >Also what version of beadarray are you using? > >Best wishes, yes! if I type that, the tiffs are displayed. I use biocunductor 2.6 beta. did install all the beadarray via biocLite("beadarray") Marian ohne Zeit- und Volumenbegrenzung? DAS TOP ANGEBOT F?R ALLE NEUEINSTEIGER f?r clevere Doppel-Sparer, nur 34,95 ? inkl. DSL- und ISDN- Grundgeb?hr!
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Matt Ritchie ▴ 460
@matt-ritchie-2048
Last seen 10.2 years ago
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