processCGH in snapCGH package
1
0
Entering edit mode
@wang-jianmin-2415
Last seen 10.1 years ago
An embedded and charset-unspecified text was scrubbed... Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20071005/ 84f51287/attachment.pl
• 537 views
ADD COMMENT
0
Entering edit mode
J-C. Marioni ▴ 30
@j-c-marioni-1339
Last seen 10.1 years ago
Hi Jianmin, Thanks for this information - I haven?t used this function for a while and hadn?t realised there was an error. I will have a look at this next week and commit a change to Bioconductor. Thanks, John John >Hello, John, > >I read your post on BioC mialing list and I don't have an account >there. So I have similar problem to process agilent 244k arrays. And >after check the code, I found that readPositionInfo() has something >missing: the Position information. So what I have done to fix the >problem is as follows: > >RG2$genes$Position = (RG2$genes$Start + RG2$genes$End)/2 > >before backgroundCorrection. > >Hope it helps. > >Best Regards, > >Jianmin Wang > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > [[alternative HTML version deleted]] > > _______________________________________________ Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor
ADD COMMENT

Login before adding your answer.

Traffic: 1026 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6