simple biomaRt query, found an error: old version
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@glazko-galina-1653
Last seen 10.3 years ago
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Steffen ▴ 500
@steffen-2351
Last seen 10.3 years ago
Hi Galina, Again are you sure these identifiers ever existed? You could check the Ensembl archives using biomaRt in mysql mode and setting archive = TRUE or go to the Ensembl website and use an archived version e.g.: http://nov2005.archive.ensembl.org/Homo_sapiens/index.html However I just checked your identifiers here and don't get anything back either. If you're sure you got the right identifiers then I would mail the Ensembl helpdesk at helpdesk at ensembl.org and ask them where you could find the corresponding annotation. Cheers, Steffen Glazko, Galina wrote: > Dear list, > > > > Please ignore my previous message. > > I get nothing (NULL) simply because my ENSEMBL IDs are from 2005 release > of ENSEMBL > > > > Then the question now is: how I can map IDs from 2005 release onto 2007 > release of ENSEMBL? > > > > Thank you! > > Best regards > > Galina > > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > >
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