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Johannes Rainer wrote: > hi, > i just downloaded the x:map mysql database (xmap_homo_sapiens_core_45_36g) > and tried to install it on my local computer. i first created the database, > and following the installation instruction i used the "create.script" to > create the database. but running > > mysql -h localhost -u jo -p homo_sapiens_core_45_36g < create.script > > resulted in the error > ERROR 1146 (42S02) at line 95: Table > 'homo_sapiens_core_45_36g.prediction_transcript' doesn't exist > > looks like some misspelling in the create.script file? > by the way i am running mysql 5.0.37 > Hi, Johannes. Is this a question better directed to the developers of the database? Ensembl has a help email that you could try. Sean

Hi, I've just checked with our developer - have you installed the homo sapiens core database (homo_sapiens_core_45_36g) from Ensembl, first? Crispin > -----Original Message----- > From: bioconductor-bounces at stat.math.ethz.ch > [mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of > Johannes Rainer > Sent: 05 July 2007 06:54 > To: bioconductor at stat.math.ethz.ch > Subject: [BioC] exonmap/xmap database install problem > > hi, > i just downloaded the x:map mysql database > (xmap_homo_sapiens_core_45_36g) and tried to install it on my > local computer. i first created the database, and following > the installation instruction i used the "create.script" to > create the database. but running > > mysql -h localhost -u jo -p homo_sapiens_core_45_36g < create.script > > resulted in the error > ERROR 1146 (42S02) at line 95: Table > 'homo_sapiens_core_45_36g.prediction_transcript' doesn't exist > > looks like some misspelling in the create.script file? > by the way i am running mysql 5.0.37 > > bests, jo > > -- > Johannes Rainer, Msc > Tyrolean Cancer Research Institute > Innrain 66, 6020 Innsbruck, Austria > Tel.: +43 512 570485 33 > Email: johannes.rainer at tcri.at > johannes.rainer at tugraz.at > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > -------------------------------------------------------- This email is confidential and intended solely for the use o...{{dropped}}