Hi, I am new in limma and looking for how to convert the Loop Design Microarray experiment into Refernce Design using limma package. Any suggestions where should I look specifically for the above reason would be appreciated. Best Regards, Amin.

Dear Amin, I expect that you are not explaining yourself well, because what you are suggesting does not make sense. The design is the way that the data were collected. If a loop design was used, you cannot go back after the experiment and "convert" to a reference design. What are the data and what do you want to find out from them. --Naomi At 05:24 PM 5/21/2007, Amin Moghaddasi wrote: >Hi, > >I am new in limma and looking for how to convert the Loop Design >Microarray experiment into Refernce Design using limma package. Any >suggestions where should I look specifically for the above reason would >be appreciated. > >Best Regards, >Amin. > >_______________________________________________ >Bioconductor mailing list >Bioconductor at stat.math.ethz.ch >https://stat.ethz.ch/mailman/listinfo/bioconductor >Search the archives: >http://news.gmane.org/gmane.science.biology.informatics.conductor Naomi S. Altman 814-865-3791 (voice) Associate Professor Dept. of Statistics 814-863-7114 (fax) Penn State University 814-865-1348 (Statistics) University Park, PA 16802-2111