RBGL installation on Ubuntu 6.10
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@lgautieralternorg-747
Last seen 10.2 years ago
> Thanks, the problem is solved! But now, I had the following error: > > * Installing *source* package 'RBGL' ... > untarring boost include tree... [console ouput here...] > make: *** [interfaces.o] Error 1 > chmod: impossibile accedere a `/usr/local/lib/R/site- library/RBGL/libs/*': > Nessun file o directory > ERROR: compilation failed for package 'RBGL' > ** Removing '/usr/local/lib/R/site-library/RBGL' My approximate understanding of Italian points me in the direction of you having not the necessary rights to write into the directory. My (wild) guess is that you installed the debian R package, and then try to install bioconductor packages as a regular user. You may want to try running 'sudo R' rather than 'R' (being aware that the installation scripts will run with administrator's rights). L. > I read in the mailing list about this error, but I didn't find the > solution... > > Thank-you > > Davide > > > 2006/11/29, lgautier at altern.org <lgautier at="" altern.org="">: >> >> > Hello everyone, >> > >> > I tryed to install RBGL package on my linux ubuntu (v. 6.10 - Edgy ). >> I >> > found the following error: >> > >> > * Installing *source* package 'RBGL' ... >> > untarring boost include tree... >> > ** libs >> > g++ -I/usr/share/R/include -I/usr/share/R/include -IboostIncl >> -fpic >> > -g >> > -O2 -c bbc.cpp -o bbc.o >> > make: g++: Command not found >> > make: *** [bbc.o] Error 127 >> > chmod: impossibile accedere a >> `/usr/local/lib/R/site-library/RBGL/libs/*': >> > Nessun file o directory >> > ERROR: compilation failed for package 'RBGL' >> > ** Removing '/usr/local/lib/R/site-library/RBGL' >> > >> > I installed g++ 4.1, lib g++ 2.8.1.3-dev, libboost-dev 1.33.1. >> > Someone could help me? >> >> Ubuntu (as well as a number of other distributions) allow one to >> have different versions of programs/libraries installed. >> >> Having the debian package g++-4.1 installed means that you have >> an executable 'g++-4.1' in your path. >> Having the debian package g++ installed will means you have the >> default version installed (and 'g++' in your path). This is probably >> want you want. >> >> >> HTH, >> >> >> L. >> >> > >> > Thank-you very much >> > >> > Davide >> > >> > [[alternative HTML version deleted]] >> > >> > _______________________________________________ >> > Bioconductor mailing list >> > Bioconductor at stat.math.ethz.ch >> > https://stat.ethz.ch/mailman/listinfo/bioconductor >> > Search the archives: >> > http://news.gmane.org/gmane.science.biology.informatics.conductor >> > >> >> >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor >
RBGL RBGL • 951 views
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