Error message: no package 'file5f906952' was found
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Wonjong Moon ▴ 80
@wonjong-moon-1900
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@james-w-macdonald-5106
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Wonjong Moon wrote: > Where can I get package 'file5f906952'? > > Here are examples when I had error message 'no package 'file5f906952' > was found' > > >>utils:::menuInstallLocal() > > package 'ALLMLL' successfully unpacked and MD5 sums checked > updating HTML package descriptions > Warning message: > no package 'file5f906952' was found in: packageDescription(i, lib.loc = > lib, field = "Title", encoding = "UTF-8") I think we will probably need more help here. What version of ALLMLL, R, at the very least. On R-2.4.0RC, I get the following result: > biocLite("ALLMLL") Running getBioC version 0.1.8 with R version 2.4.0 Running biocinstall version 1.9.6 with R version 2.4.0 (under development) Your version of R requires version 1.9 of Bioconductor (under development too). trying URL 'http://bioconductor.org/packages/1.9/data/experiment/bin/windows/cont rib/2.4/ALLMLL_1.1.2.zip' Content type 'application/zip' length 39343027 bytes opened URL downloaded 38420Kb package 'ALLMLL' successfully unpacked and MD5 sums checked The downloaded packages are in C:\WINDOWS\Temp\Rtmp7GBEqb\downloaded_packages updating HTML package descriptions > library(ALLMLL) Loading required package: affy Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. Loading required package: affyio On R-2.3.1, biocLite() doesn't seem to be able to find the package, so I downloaded ALLMLL_1.0.2.zip and installed locally: > utils:::menuInstallLocal() package 'ALLMLL' successfully unpacked and MD5 sums checked updating HTML package descriptions > library(ALLMLL) > So the package looks good to me. Best, Jim > > >>help.search("somefunc") > > Error in help.search("somefunc") : could not find package 'file5f906952' > > Thank you. > > Wonjong > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623 ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues.
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Dear Wonjong, I've had a very similar error e few months ago. It can occur after a failed installation of some other package, which was not removed from its temporary folder. Probably there is a folder called file5f906952 in your R/library folder. Try removing that folder and doing the installation again. That worked for me. Jelle -----Oorspronkelijk bericht----- Van: James W. MacDonald [mailto:jmacdon at med.umich.edu] Verzonden: maandag 2 oktober 2006 18:21 Aan: Wonjong Moon CC: bioconductor at stat.math.ethz.ch Onderwerp: Re: [BioC] Error message: no package 'file5f906952' was found Wonjong Moon wrote: > Where can I get package 'file5f906952'? > > Here are examples when I had error message 'no package 'file5f906952' > was found' > > >>utils:::menuInstallLocal() > > package 'ALLMLL' successfully unpacked and MD5 sums checked > updating HTML package descriptions > Warning message: > no package 'file5f906952' was found in: packageDescription(i, lib.loc = > lib, field = "Title", encoding = "UTF-8") I think we will probably need more help here. What version of ALLMLL, R, at the very least. On R-2.4.0RC, I get the following result: > biocLite("ALLMLL") Running getBioC version 0.1.8 with R version 2.4.0 Running biocinstall version 1.9.6 with R version 2.4.0 (under development) Your version of R requires version 1.9 of Bioconductor (under development too). trying URL 'http://bioconductor.org/packages/1.9/data/experiment/bin/windows/cont ri b/2.4/ALLMLL_1.1.2.zip' Content type 'application/zip' length 39343027 bytes opened URL downloaded 38420Kb package 'ALLMLL' successfully unpacked and MD5 sums checked The downloaded packages are in C:\WINDOWS\Temp\Rtmp7GBEqb\downloaded_packages updating HTML package descriptions > library(ALLMLL) Loading required package: affy Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. Loading required package: affyio On R-2.3.1, biocLite() doesn't seem to be able to find the package, so I downloaded ALLMLL_1.0.2.zip and installed locally: > utils:::menuInstallLocal() package 'ALLMLL' successfully unpacked and MD5 sums checked updating HTML package descriptions > library(ALLMLL) > So the package looks good to me. Best, Jim > > >>help.search("somefunc") > > Error in help.search("somefunc") : could not find package 'file5f906952' > > Thank you. > > Wonjong > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623 ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues.
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