EDASeq: is it possible to normalize within lanes for more than one covariate?
0
0
Entering edit mode
abf ▴ 30
@abf-14661
Last seen 2.3 years ago
United States

Is it appropriate to normalize within lanes for each covariate in sequence, for example:

dataWithin <- withinLaneNormalization(data,"gc", which="full")
dataWithin <- withinLaneNormalization(dataWithin,"length", which="full")
dataNorm <- betweenLaneNormalization(dataWithin, which="full")

If this is appropriate, are there any recommendations for method selection or order of operations?

EDASeq normalization GC length RNASeq • 658 views
ADD COMMENT

Login before adding your answer.

Traffic: 681 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6