Entering edit mode
emisecherre
•
0
@emisecherre-23089
Last seen 4.2 years ago
Hello ! I would like to use Pathview and ReactomePA to visualize my pathways. I have a list of genes and metabolites of interest, and i would like to know how to highlight them (different color for exemple) in the pathway maps returned by these packages ? Thanks for your answer
For ReactomePA, i don't get if theres an other way to color nodes than using p-values as i want to color genes and metabolites from my lists. And for pathview, i see its described on the section "8.1 Compound and gene data", but i really don't understand which parameters i have to change to color specific elements...