EBTest error please add gene/isoform names to the data matrix
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lli2 • 0
@lli2-23608
Last seen 4.4 years ago

I use library(EBSeq) for differential expression analysis, When I run EBOut=EBTest(Data=ebvRna1,Conditions=condition1,sizeFactors=sizes, maxround=5) got an error message: Error in EBTest(Data = ebvRna1, Conditions = condition1, sizeFactors = sizes, : Please add gene/isoform names to the data matrix But I checked my Data by str(ebvRna1) int [1:395, 1:20531] 2 2 2 2 2 2 2 2 2 2 ... - attr(*, "dimnames")=List of 2 ..$ : NULL ..$ : chr [1:20531] "LOC100130426" "UBE2Q2P3" "UBE2Q2P3.1" "LOC149767" ...

It looks I have the gene names for my matrix. Does anyone have any ideas about this?

Thanks a lot, Lilly

EBSeq • 727 views
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Problem solved, thanks, Lilly

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