Gviz GeneRegionTrack labels on Y ais
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@fenton-christopher-graham-5504
Last seen 4.9 years ago

Plotting read coverage over generegion track with Giz. Selecting gene region by location chr, start, stop. I get several transcripts that start outside the defined region, hence no transcript label in plot. I could label exons, but that is messy. Has anyone solved how to label these transcripts?

Chris

annotation • 430 views
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@james-w-macdonald-5106
Last seen 4 minutes ago
United States

As an example

library(Gviz)
data(cyp2b10)
grTrack <- GeneRegionTrack(cyp2b10, showID = TRUE, just.group = "above")
plotTracks(grTrack, showId=TRUE) 
plotTracks(grTrack, showId=TRUE,from=25911238, to = 25917285 ) 

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