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kkyung412
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@kkyung412-21293
Last seen 5.4 years ago
Hello.
I am getting an error message with the exomecopy, compileCopyCountSegments
compileCopyCountSegments(fit.list)
Error in FUN(X[[i]], ...) :
trying to get slot "path" from an object of a basic class ("NULL") with no slots
When I looked at the Fit.list, there was really NULL data How can I handle this?
Please help me.ㅜㅜ [[3]][[15]] NULL
[[3]][[16]] NULL
[[3]][[17]] NULL
[[3]][[18]] NULL
[[3]][[19]] NULL
[[3]][[20]] NULL
[[3]][[21]] NULL
[[3]][[22]] NULL
[[3]][[23]] NULL
[[3]][[24]] NULL
hi Michael
I can't draw a plot now. The warning message for exomeCopy was as follows. Please help me.ㅜㅜ
1: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 2: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 3: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 4: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 5: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 6: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 7: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 8: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL 9: In exomeCopy(counts[seqnames(counts) == seq.name], sample.name, : More than 90% of sample counts are zero, exomeCopy will return NULL
It looks like the reason it returns NULL is because there are many 0’s.
It looks like the reason it returns NULL is because there are many 0’s.