New to bioinformatics
3
1
Entering edit mode
kim.klingler ▴ 20
@kimklingler-20605
Last seen 5.5 years ago

Hello, I recently started working for a company that is interested in getting into bioinformatics. Although I've worked as a statistician for several years, I have little or no experience with bioinformatics. I am looking for guidance as to some good reference books, online classes, journal articles. Any help you could provide would be appreciated. Thanks, Kim

limma • 1.4k views
ADD COMMENT
1
Entering edit mode
Kevin Blighe ★ 4.0k
@kevin
Last seen 4 hours ago
Republic of Ireland

As you added a limma tag, too, I thought to post a link to this presentation by Gordon Smyth: Differential Expression Analysis using limma (originally found by Friederike).

You should also be aware of the Biostars community (where I am Moderator): https://www.biostars.org/

Whereas Bioconductor is specifically for Bioconductor packages (R Programming Language), Biostars is for everything and anything to do with bioinformatics, and is a very active forum.

Another community:

Kevin

ADD COMMENT
1
Entering edit mode

Thanks, Kevin. That's exactly what I'm looking for!

ADD REPLY
0
Entering edit mode
@martin-morgan-1513
Last seen 3 months ago
United States

Modern Statistics for Modern Biology with its many bioinformatic ties might for a great connection between your statistical training and bioinformatic data.

ADD COMMENT
0
Entering edit mode

Thanks! I'll check it out.

ADD REPLY
0
Entering edit mode

It seems to me that Susan's book is aimed at biologists, i.e., the aim is to teach statistics to biologists rather than biology to a statistician.

ADD REPLY
0
Entering edit mode
Yuan Tian ▴ 290
@yuan-tian-13904
Last seen 6 months ago
United Kingdom

Hi Kim:

Thanks for the question. I personally think it's a very good question, to gather some useful resource for future new starters as well.

I think HarvardX Biomedical Data Science Open Online Training is good. Though I am too busy to finish them all, I do recommend. It's a chance to systemically go through many things, instead of like me, leaning this thing a bit, that thing a bit, then waste many years to forming them up together like completing a puzzle.

Also a statistic book. After a couple of years of study, I think math and statistic is the boundary between normal guys like me and real masters, not coding.

Finally, I recommend two little things benefited me: 1) at least be a rough full-stack web developer as well (any language is OK); 2) Writing blog to record everything you learned and did.

Above are just some humble ideas and failure lesson in my past, hopefully, they could help future talents even a little bit.

Best Tian

ADD COMMENT

Login before adding your answer.

Traffic: 619 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6