MAGeCKFlute - Installation

0

Entering edit mode

royce.wilkinson • 0

@roycewilkinson-19960

Last seen 5.8 years ago

For the step with the command

conda create -n mageck-vispr mageck mageck-vispr python=3)

I get a message 'Solving environment' with a spinning 'icon' as if the command is functioning, but it never seems to complete (10 + minutes). Do you have any idea what might be the issue?

Thanks, Royce

MAGeCKFlute • 1.5k views

ADD COMMENT • link 5.8 years ago royce.wilkinson • 0

0

Entering edit mode

You have a trailing ) which doesn't work

try this,

conda create --name mageck-vispr mageck mageck-vispr python=3

But make sure you have your conda channels set correctly (as given by the bioconda page)

Also, it's taking a while on my machine as well. But, i suggest you contact, https://gitter.im/bioconda/Lobby.

ADD REPLY • link 5.8 years ago nitesh.turaga ▴ 140

0

Entering edit mode

That was a copy and paste error into my question.

I had to delete the older version of MaGeCK on my computer. After that, it worked as expected.

ADD REPLY • link 5.8 years ago royce.wilkinson • 0

Login before adding your answer.