Does anyone have any experience using R or Bioconductor with an open source database specifically with microarray data? I am hoping to discover a database data management system for microarrays that allows for a half-way decent integration with R. Thanks very much, Dick ********************************************************************** ********* Richard P. Beyer, Ph.D. University of Washington Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 Seattle, WA 98105-6099

ive written functions to insert the information in an exprSet into 5 tables in a postgres data base. i halfway to writing one that goes the other way. i used the RPgSQL package. I tried RDBI but I was getting a segmentation fault i couldnt fix. I hear RDBI is much faster. On Wed, 9 Apr 2003, Dick Beyer wrote: > Does anyone have any experience using R or Bioconductor with an open source database specifically with microarray data? > > I am hoping to discover a database data management system for microarrays that allows for a half-way decent integration with R. > > Thanks very much, > Dick > ******************************************************************** *********** > Richard P. Beyer, Ph.D. University of Washington > Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 > Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 > Seattle, WA 98105-6099 > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor >