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mictadlo
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10
@mictadlo-10885
Last seen 4.9 years ago
Hi, I created VCF files for 5 cultivars in the following way:
bcftools mpileup -Ou -f $2 ${1}/all.sorted.dedup.bam | bcftools call -mv -Ob -o ${1}/calls.bcf
bcftools view -i '%QUAL>=20' ${1}/calls.bcf > ${1}/calls-gt-q20.vcf
How can I create a venn-diagram out of those files?
Thank you in advance,