The Bioconductor Team is continuing to identify packages that will be deprecated in the next release to allow for the Bioconductor community to respond accordingly.

The current list of deprecated packages for Release 3.8:

Maintainer requested deprecation:

Software:

BiocInstaller (replaced with BiocManager)

GoogleGenomics

Experiment Data Package:

iontreeData

MSBdata  being renamed to MSMB

Unresponsive/not-maintained packages:

Software:

IrisSpatialFeatures

facopy

gaucho

nudge

RamiGO

mQTL.NMR

cytofkit

pbcmc

GeneSelector

ampliQueso

prot2D

We will continue to identify packages that are not maintained/unresponsive to be deprecated in release 3.9.