I try to read counts using featurecounts and I have a warning says:
could somebody help me to figureout the problem?
Warning: failed to find the gene identifier attribute in the 9th column of the provided GTF file.
The specified gene identifier attribute is 'gene-id'
The attributes included in your GTF annotation are 'gene_id "ENSOARG00000017577"; gene_version "1"; transcript_id "ENSOART00000019126"; transcript_version "1"; exon_numbe r "1"; gene_name "ING5"; gene_source "ensembl"; gene_biotype "protein_coding"; transcript_name "ING5-201"; transcript_source "ensembl"; transcript_biotype "protein_coding "; exon_id "ENSOARE00000174320"; exon_version "1";'
|| Features : 239130 ||
|| Meta-features : 1 ||
|| Chromosomes/contigs : 702 ||
|| ||
|| Process BAM file resultsAligned.sortedByCoord.out.bam... ||
|| Paired-end reads are included. ||
|| Assign reads to features... ||
|| Total reads : 33880102 ||
|| Successfully assigned reads : 12941327 (38.2%) ||
|| Running time : 0.96 minutes ||
|| ||
|| Read assignment finished. ||
|| ||
|| Summary of counting results can be found in file "counts.txt.summary"