MethylSig is not giving DMRs with no replicates
0
0
Entering edit mode
nilaycan • 0
@nilaycan-16507
Last seen 6.4 years ago

Hello all,

I am trying to run MethylSig with my no biological or technical replicate data-sets. In many forums and their manual also, they declared that if you do not have "any replicates", you should use Fisher's exact test instead of t-test. I changed properly all the functions and parameters according to this criteria but I am getting the same error. The error is : Error during wrapup: 'x' must be an array of at least two dimensions. methylSigCalc function causes this error most probably. 

Is it possible that I am doing something wrong or improper? Can anyone give me some idea about this issue?

Thanks in advance,

Nilay

methylsig no replicates dmr • 838 views
ADD COMMENT

Login before adding your answer.

Traffic: 736 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6