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Hi everyone,
I extracted new annotated gene features from IGV as bed file with this format:
chr17 11049086 11051487 YourSeq 999.4911 - 11049086 11051487 . 2 1735,230, 0,2171, chr17 11044924 11051487 YourSeq 995.2607 - 11044924 11051487 . 4 81,124,198,230, 0,2630,5699,6333,
now I want to plot it with Gviz along with my RNA-seq data .. I tried to load it as bed file but the rtracklayer complained .. any help to get this done properly
thanks much
I figured it out .. jus have to convert this bed format to gff3 and that it.